By strictly following the arrays of your question you can use the Intersect linq:
int[] numeros = new int[] { 1, 2, 3, 4, 5, 6, 7, 8, 9 };
int[] pares = new int[] { 02, 04, 06, 08, 10 };
int[] impares = new int[] { 01, 03, 05, 07, 09 };
int[] inputsPares = numeros.Intersect(pares).ToArray();
int[] inputsImpares = numeros.Intersect(impares).ToArray();
int quantosPares = inputsPares.Length;
int quantosImpares = inputsImpares.Length;
For the problem in question, which consists only of checking whether it is even or odd, you can use the mod operator, so arrays are not required pares and impares.
int[] inputsPares = numeros.Where(x => x % 2 == 0).ToArray();
int[] inputsImpares = numeros.Where(x => x % 2 != 0).ToArray();