1
I intend to associate a column of Ids to their name. I mean, in each line of IDS I have a list of genes. and to that list of genes I want to associate the names of the genes. Here is my code:
geneIDS<- Cas1_go_BP2[, 6] #vector with the IDS
allgencNames<- vector(length = length(geneIDS))
for (i in 1:length(geneIDS)) {
geneIDS_split<- unlist(strsplit(as.character(geneIDS[i]), ","))
geneIDs_split2<-as.character(gsub(" ", "", as.character(geneIDS_split)))
geneNames_split2<-DEG_ID[match(geneIDs_split2, DEG_ID[,2]), 1]
geneNames<- paste(geneNames_split2, collapse = ",")
allgencNames[i]<- geneNames
}
all_go_BP<- cbind(Cas1_go_BP, geneNames)
Welcome to Stackoverflow Brasil! Unfortunately, this question cannot be reproduced by anyone trying to answer it. Please, take a look at this link and see how to ask a reproducible question in R. So, people who wish to help you will be able to do this in the best possible way.
– Marcus Nunes
Your question is confused, but it looks like a problem that can be solved with the function
merge().– Márcio Mocellin
Good morning, I’ve solved the problem, thank you
– Sofia
@Sofia then answer yourself with the solution and close the question!
– Flavio Barros